Skip to content

soft_geneiobio

Olivier Gueudelot edited this page Aug 8, 2016 · 3 revisions

Resume :

gene.iobio is a web app for investigating potential disease-causing variants. Thanks to lot and immediate visual feedback this project aims to make more understanding complex genomic datasets more intuitive, and analysis more interactive. This tool seem perfect to do some quick and predifined diagnostics.

  • Website
  • INPUTS : VCF, BAM
  • OUTPUTS : no save/export feature proposed. Only url can be save to reload settings
  • OS : online app.
  • Techno : online app.
Pros:
  • User friendly and reactivity - The hmi of the application is smooth, quick, no lag, no freeze...
  • Favourites - Gene can be "pinned" as Favourite to be quickly loaded/reached
  • Phenotype - The application can select for you the genes that should be analyzed according to a given phenotype using Phenolyzer
  • Visual resume - Each analyzed gene have a "resume" with icones
  • Gene description - A description of the gene is provided
  • Free API + documentation - Developpers can create their own app using the iobio api
Cons :
  • Only few predifined filters
  • No annotation - Only filtering with predifined databases
  • User alone - Result cannot be saved/shared

Screenshots

Clone this wiki locally