added spatial experiment handling #40
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Please also add a set of appropriate unit tests (see here: )Please also bump the version in the DESCRIPTION file and provide a summary of the changes in the NEWS file |
deeenes
reviewed
Oct 18, 2021
| # include TF activities into SingleCellExperiment object | ||
| dorothea_se <- SummarizedExperiment::SummarizedExperiment(tf_activities) | ||
| SummarizedExperiment::assayNames(dorothea_se) <- "tf_activities" | ||
| SingleCellExperiment::altExp(input, "dorothea") <- dorothea_se | ||
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| return(input) | ||
| } | ||
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| #' @export |
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If you export this, shouldn't it have some docs?
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in viper_wrapper.R I added handling of the new SpatialExperiment