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@hubmapconsortium

HuBMAP Consortium

This is the GitHub organization for repos related to the work of the HuBMAP Consortium.

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  1. entity-api entity-api Public

    A set of web service calls to return information about HuBMAP entities

    Python 3 1

  2. gateway gateway Public

    Python

  3. search-api search-api Public

    HuBMAP search service and associated pieces to create an index

    Python 2 2

  4. portal-ui portal-ui Public

    HuBMAP Data Portal front end

    TypeScript 12 2

  5. ingest-ui ingest-ui Public

    HuBMAP Data Ingest Portal

    JavaScript 4

  6. ingest-pipeline ingest-pipeline Public

    Data ingest pipeline(s) for QA/metadata etl/post-processing

    Python 4 5

Repositories

Showing 10 of 175 repositories
  • ingest-api Public
    hubmapconsortium/ingest-api’s past year of commit activity
    Python 0 MIT 0 19 1 Updated Dec 3, 2024
  • user-templates-api Public
    hubmapconsortium/user-templates-api’s past year of commit activity
    Python 0 MIT 3 2 3 Updated Dec 3, 2024
  • portal-visualization Public

    Given HuBMAP Dataset JSON, creates a Vitessce configuration

    hubmapconsortium/portal-visualization’s past year of commit activity
    Python 1 MIT 1 11 5 Updated Dec 3, 2024
  • documentation Public

    General Documentation For HuBMAP

    hubmapconsortium/documentation’s past year of commit activity
    JavaScript 0 1 3 0 Updated Dec 3, 2024
  • portal-ui Public

    HuBMAP Data Portal front end

    hubmapconsortium/portal-ui’s past year of commit activity
    TypeScript 12 MIT 2 200 28 Updated Dec 3, 2024
  • hra-kg Public

    HRA-KG: Human Reference Atlas Knowledge Graph

    hubmapconsortium/hra-kg’s past year of commit activity
    Mermaid 3 MIT 1 3 1 Updated Dec 3, 2024
  • hra-registrations Public

    Manually curated HRA Dataset Graphs

    hubmapconsortium/hra-registrations’s past year of commit activity
    HTML 1 MIT 0 14 0 Updated Dec 3, 2024
  • user_workspaces_server Public
    hubmapconsortium/user_workspaces_server’s past year of commit activity
    Python 0 MIT 1 6 2 Updated Dec 3, 2024
  • ingest-pipeline Public

    Data ingest pipeline(s) for QA/metadata etl/post-processing

    hubmapconsortium/ingest-pipeline’s past year of commit activity
    Python 4 MIT 5 79 19 Updated Dec 3, 2024
  • py-hubmapbags Public

    Python package used to build the submission for the CFDE Search Portal

    hubmapconsortium/py-hubmapbags’s past year of commit activity
    Jupyter Notebook 1 2 20 2 Updated Dec 3, 2024
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