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18 Open 7 Closed
18 Open 7 Closed
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Issues list

Improve krona tables
#34 opened Dec 2, 2024 by sofstam Release 1
Include github actions to follow nf-core structure.
#30 opened Nov 26, 2024 by sofstam Release 1
1
@samuell
Update modules to include nf-test
#29 opened Nov 26, 2024 by sofstam Release 1
1
@sofstam
Keep syntax constrained to the Nextflow Language Specification enhancement New feature or request
#28 opened Nov 20, 2024 by samuell
2
Add support for illumina
#26 opened Nov 5, 2024 by bokelund
@AnderssonOlivia
Results in phyloseq format.
#24 opened Oct 25, 2024 by bokelund
@kdannenberg
Random idea: More recognizable name
#22 opened Oct 25, 2024 by samuell
1
Get reads assigned to a particular species
#20 opened Aug 22, 2024 by Danieljaen
1
add emu combine-outputs enhancement New feature or request
#19 opened May 16, 2024 by fwa93
save preprocessed reads for porechop_abi
#17 opened May 8, 2024 by fwa93
Add log file for EMU module enhancement New feature or request
#13 opened Apr 8, 2024 by fwa93
Add support for pacbio enhancement New feature or request
#12 opened Apr 8, 2024 by fwa93
Relative path + absolute path in command bug Something isn't working
#11 opened Apr 8, 2024 by fwa93
check that the tools are working properly. enhancement New feature or request
#9 opened Apr 8, 2024 by fwa93
Addition of 18S/ITS identification
#8 opened Apr 8, 2024 by ryanjameskennedy
@ryanjameskennedy @fwa93
Find a place to store all databases for emu so that users can download them. help wanted Extra attention is needed
#7 opened May 4, 2023 by fwa93
Add visualizationfor the results. enhancement New feature or request
#6 opened May 4, 2023 by fwa93
@kdannenberg
1
Remove references to nf-core documentation Improvements or additions to documentation
#2 opened May 4, 2023 by fwa93
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