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feat: Snakemake8 #435

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jonca79 wants to merge 2 commits into develop from snakemake8

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jonca79 commented Mar 18, 2024 •

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Updated profile with apptainer settings
Use python 3.11
Updated requirements.txt (added execuror plugin, rm som no longer needed)
Removed misc module which also removed a lot of ruleorders
Added wildcard constraints for a number of rules

jonca79 changed the title ~~Snakemake8~~ feat: Snakemake8

jonca79 force-pushed the snakemake8 branch from b57dc99 to e4c8386 Compare

March 20, 2024 10:36

jonca79 and others added 2 commits

March 20, 2024 11:44


          feat: pipline updated for snakemake version 8

4a2de98


          test: snakefmt

7a428ba

jonca79 force-pushed the snakemake8 branch from e4c8386 to 7a428ba Compare

March 20, 2024 10:48

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Smeds Awaiting requested review from Smeds Smeds will be requested when the pull request is marked ready for review Smeds is a code owner

monikaBrandt Awaiting requested review from monikaBrandt monikaBrandt will be requested when the pull request is marked ready for review monikaBrandt is a code owner

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