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gff-to-gtf - output contains only exons #10

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sev-lcb opened this issue Apr 5, 2019 · 1 comment
Open

gff-to-gtf - output contains only exons #10

sev-lcb opened this issue Apr 5, 2019 · 1 comment

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@sev-lcb
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sev-lcb commented Apr 5, 2019

Hi,

the output of gff-to-gtf.py contains only exon features even if the input file is a complete GFF file with all features...
Could you please fix this error?

Thanks.
Séverine
@sev-lcb
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sev-lcb commented Apr 8, 2019

I used this GFF file from the NCBI :
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/865/GCF_000008865.1_ASM886v1/GCF_000008865.1_ASM886v1_genomic.gff

Do you think it could be an error in the NCBI GFF format ?
Could anyone test it ?

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@sev-lcb