Repositories list

• GoProRecorder

  Public
  Python

  •0•0•0•0•Updated Apr 4, 2024Apr 4, 2024

• Prediction-of-Structural-Color-of-Liquid-Crystals-via-Machine-Learning

  Public
  Python

  •0•0•0•0•Updated Mar 8, 2024Mar 8, 2024

• PDFtoTextExtractor

  Public
  Python

  •3•1•0•0•Updated Nov 30, 2023Nov 30, 2023

• NNLBD

  Public
  Neural Network Architectures For Open and Closed Literature-Based Discovery

  Python

  •0•4•0•0•Updated May 28, 2023May 28, 2023

• RelEx

  Public
  Python

  •0•8•9•13•Updated Feb 10, 2023Feb 10, 2023

• SMM4H

  Public
  Python

  •0•3•0•15•Updated Dec 27, 2022Dec 27, 2022

• medaCy

  Public
  🏥 Medical Text Mining and Information Extraction with spaCy

  machine-learningnatural-language-processingmetamap+ 5medical-natural-language-processingclinical-text-processinginformation-extractionspacymedical-text-mining

  Python

  •

  GNU General Public License v3.0

  •91•432•20•3•Updated Nov 1, 2022Nov 1, 2022

• PaperScraper

  Public
  A web scraping tool to systematically extract the text of scientific papers and corresponding metadata from university accessible journals.

  natural-language-processingweb-scrapingselenium-webdriver+ 3scientific-publicationspubmed-articles-grabberjournal-web-scraper

  Python

  •

  GNU General Public License v3.0

  •61•189•2•1•Updated Oct 14, 2022Oct 14, 2022

• python_tools

  Public
  Tools to support text processing

  Python

  •

  GNU Affero General Public License v3.0

  •0•2•0•0•Updated Jul 29, 2022Jul 29, 2022

• PDF2TXT

  Public
  Converts a pdf document to text.

  Java

  •

  Apache License 2.0

  •2•1•0•0•Updated Apr 15, 2022Apr 15, 2022

• RelEx-GCN

  Public
  Python

  •0•0•0•0•Updated Mar 10, 2022Mar 10, 2022

• RelEx-CNN

  Public
  Python

  •0•0•0•0•Updated Feb 15, 2022Feb 15, 2022

• BioCreative-VII-Track1

  Public
  Jupyter Notebook

  •0•2•0•0•Updated Oct 19, 2021Oct 19, 2021

• KrimpaTool

  Public
  A tool for retrieving full text of papers from a DOI

  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Oct 1, 2021Oct 1, 2021

• medinify

  Public
  Python text classification package with a focus on medical text.

  Python

  •

  GNU General Public License v3.0

  •9•16•12•0•Updated Jun 28, 2021Jun 28, 2021

• PLOTnikov

  Public
  Python

  •0•0•0•0•Updated Apr 17, 2021Apr 17, 2021

• multitasking_transformers

  Public
  Multitask Learning with Pretrained Transformers

  deep-learningbertmulti-task-learning+ 1clinical-nlp

  Python

  •

  MIT License

  •9•40•2•0•Updated Mar 20, 2021Mar 20, 2021

• elise

  Public
  Entity Labeling Independent Sentences with ELMo

  Python

  •0•0•0•0•Updated Dec 17, 2020Dec 17, 2020

• n2c2_2018_task2_significance

  Public
  Python

  •3•0•0•0•Updated Oct 21, 2020Oct 21, 2020

• multitasking_bert-1

  Public
  Python

  •1•1•0•0•Updated Oct 13, 2020Oct 13, 2020

• pseudobert

  Public
  Python

  •1•0•0•0•Updated Aug 27, 2020Aug 27, 2020

• medaCy_model_clinical_notes

  Public
  A medaCy compatible model for clinical note information extraction.

  Python

  •

  GNU General Public License v3.0

  •4•11•3•0•Updated May 25, 2020May 25, 2020

• medinify-datasets

  Public
  Datasets for use with the Medinify package

  0•0•0•0•Updated Aug 23, 2019Aug 23, 2019

• medaCy_demo

  Public
  A web app that demonstrates medaCy using models created by VCU's Nanoinformatics Lab

  HTML

  •2•1•0•0•Updated Apr 26, 2019Apr 26, 2019

• medaCy_dataset_template

  Public
  a template for creating medaCy compatible datasets

  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Mar 21, 2019Mar 21, 2019

• NER-OUS

  Public
  Biomedical NER system utilizing Bidirectional LSTM-CRF model.

  Python

  •2•2•0•1•Updated Mar 5, 2019Mar 5, 2019

• Sentiment-Classification

  Public
  Python

  •

  GNU General Public License v3.0

  •4•2•0•0•Updated Nov 30, 2018Nov 30, 2018

• SpeechToText

  Public
  psynlp

  Java

  •0•0•0•0•Updated Sep 7, 2018Sep 7, 2018

• TACChrono

  Public
  Parsing time normalizations from text.

  Python

  •

  GNU General Public License v3.0

  •4•0•0•0•Updated Jul 25, 2018Jul 25, 2018

• TAC2018Scripts

  Public
  Perl

  •0•0•0•0•Updated Jul 2, 2018Jul 2, 2018