0.5.0: pytest fails in tests/test_execute.py with DeprecationWarning

[kloczek]

I'm packaging your module as an rpm package so I'm using the typical PEP517 based build, install and test cycle used on building packages from non-root account.

• python3 -sBm build -w --no-isolation
• because I'm calling build with --no-isolation I'm using during all processes only locally installed modules
• install .whl file in </install/prefix> using 'installer` module
• run pytest with $PYTHONPATH pointing to sitearch and sitelib inside </install/prefix>
• build is performed in env which is cut off from access to the public network (pytest is executed with -m "not network")

Here is pytest output:

+ PYTHONPATH=/home/tkloczko/rpmbuild/BUILDROOT/python-jupyter-sphinx-0.5.0-2.fc35.x86_64/usr/lib64/python3.8/site-packages:/home/tkloczko/rpmbuild/BUILDROOT/python-jupyter-sphinx-0.5.0-2.fc35.x86_64/usr/lib/python3.8/site-packages
+ /usr/bin/pytest -ra -m 'not network'
============================= test session starts ==============================
platform linux -- Python 3.8.18, pytest-7.4.3, pluggy-1.3.0
rootdir: /home/tkloczko/rpmbuild/BUILD/jupyter-sphinx-0.5.0
configfile: pyproject.toml
testpaths: tests/
collected 0 items / 1 error

==================================== ERRORS ====================================
____________________ ERROR collecting tests/test_execute.py ____________________
/usr/lib/python3.8/site-packages/_pytest/runner.py:341: in from_call
    result: Optional[TResult] = func()
/usr/lib/python3.8/site-packages/_pytest/runner.py:372: in <lambda>
    call = CallInfo.from_call(lambda: list(collector.collect()), "collect")
/usr/lib/python3.8/site-packages/_pytest/python.py:536: in collect
    self._inject_setup_module_fixture()
/usr/lib/python3.8/site-packages/_pytest/python.py:550: in _inject_setup_module_fixture
    self.obj, ("setUpModule", "setup_module")
/usr/lib/python3.8/site-packages/_pytest/python.py:315: in obj
    self._obj = obj = self._getobj()
/usr/lib/python3.8/site-packages/_pytest/python.py:533: in _getobj
    return self._importtestmodule()
/usr/lib/python3.8/site-packages/_pytest/python.py:622: in _importtestmodule
    mod = import_path(self.path, mode=importmode, root=self.config.rootpath)
/usr/lib/python3.8/site-packages/_pytest/pathlib.py:567: in import_path
    importlib.import_module(module_name)
/usr/lib64/python3.8/importlib/__init__.py:127: in import_module
    return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1014: in _gcd_import
    ???
<frozen importlib._bootstrap>:991: in _find_and_load
    ???
<frozen importlib._bootstrap>:975: in _find_and_load_unlocked
    ???
<frozen importlib._bootstrap>:671: in _load_unlocked
    ???
/usr/lib/python3.8/site-packages/_pytest/assertion/rewrite.py:186: in exec_module
    exec(co, module.__dict__)
tests/test_execute.py:24: in <module>
    from jupyter_sphinx.ast import (
../../BUILDROOT/python-jupyter-sphinx-0.5.0-2.fc35.x86_64/usr/lib/python3.8/site-packages/jupyter_sphinx/__init__.py:6: in <module>
    import ipywidgets
/usr/lib/python3.8/site-packages/ipywidgets/__init__.py:25: in <module>
    from .widgets import *
/usr/lib/python3.8/site-packages/ipywidgets/widgets/__init__.py:4: in <module>
    from .widget import Widget, CallbackDispatcher, register, widget_serialization
/usr/lib/python3.8/site-packages/ipywidgets/widgets/widget.py:13: in <module>
    from ipykernel.comm import Comm
/usr/lib/python3.8/site-packages/ipykernel/__init__.py:7: in <module>
    from .connect import *
/usr/lib/python3.8/site-packages/ipykernel/connect.py:12: in <module>
    import jupyter_client
/usr/lib/python3.8/site-packages/jupyter_client/__init__.py:3: in <module>
    from .asynchronous import AsyncKernelClient
/usr/lib/python3.8/site-packages/jupyter_client/asynchronous/__init__.py:1: in <module>
    from .client import AsyncKernelClient  # noqa
/usr/lib/python3.8/site-packages/jupyter_client/asynchronous/client.py:12: in <module>
    from ..client import KernelClient, reqrep
/usr/lib/python3.8/site-packages/jupyter_client/client.py:20: in <module>
    from .connect import ConnectionFileMixin
/usr/lib/python3.8/site-packages/jupyter_client/connect.py:22: in <module>
    from jupyter_core.paths import jupyter_data_dir, jupyter_runtime_dir, secure_write
/usr/lib/python3.8/site-packages/jupyter_core/paths.py:210: in <module>
    deprecation(
/usr/lib/python3.8/site-packages/jupyter_core/utils/__init__.py:89: in deprecation
    warnings.warn(message, DeprecationWarning, stacklevel=stacklevel + 1)
E   DeprecationWarning: Jupyter is migrating its paths to use standard platformdirs
E   given by the platformdirs library.  To remove this warning and
E   see the appropriate new directories, set the environment variable
E   `JUPYTER_PLATFORM_DIRS=1` and then run `jupyter --paths`.
E   The use of platformdirs will be the default in `jupyter_core` v6
=========================== short test summary info ============================
ERROR tests/test_execute.py - DeprecationWarning: Jupyter is migrating its paths to use standard platform...
!!!!!!!!!!!!!!!!!!!! Interrupted: 1 error during collection !!!!!!!!!!!!!!!!!!!!
=============================== 1 error in 1.01s ===============================

List of installed modules in build env:

Package                       Version
----------------------------- ----------
alabaster                     0.7.13
asttokens                     2.4.1
attrs                         23.1.0
Babel                         2.14.0
backcall                      0.2.0
beautifulsoup4                4.12.2
bleach                        6.1.0
build                         1.0.3
charset-normalizer            3.3.2
comm                          0.2.0
contourpy                     1.0.7
cppclean                      0.13
cycler                        0.12.1
debugpy                       1.8.0
decorator                     5.1.1
defusedxml                    0.7.1
distro                        1.8.0
dnf                           4.18.2
docutils                      0.20.1
editables                     0.5
exceptiongroup                1.1.3
executing                     2.0.1
fastjsonschema                2.18.0
fonttools                     4.47.0
gpg                           1.23.2
hatchling                     1.21.0
html5lib                      1.1
idna                          3.6
imagesize                     1.4.1
importlib-metadata            7.0.1
importlib-resources           6.1.1
iniconfig                     2.0.0
installer                     0.7.0
ipykernel                     6.28.0
ipython                       8.12.0
ipywidgets                    8.0.3
jedi                          0.19.1
Jinja2                        3.1.2
jsonschema                    4.19.1
jsonschema-specifications     2023.7.1
jupyter_client                8.6.0
jupyter_core                  5.6.0
jupyterlab-pygments           0.1.2
jupyterlab-widgets            3.0.8
kiwisolver                    1.4.5
libdnf                        0.72.0
MarkupSafe                    2.1.3
matplotlib                    3.6.3
matplotlib-inline             0.1.6
mistune                       2.0.5
nbclient                      0.9.0
nbconvert                     7.13.1
nbformat                      5.9.2
nest-asyncio                  1.5.8
numpy                         1.24.4
olefile                       0.47
packaging                     23.2
pandocfilters                 1.5.0
parso                         0.8.3
pathspec                      0.12.1
pexpect                       4.9.0
pickleshare                   0.7.5
Pillow                        10.1.0
pkgutil_resolve_name          1.3.10
platformdirs                  4.1.0
pluggy                        1.3.0
prompt-toolkit                3.0.43
psutil                        5.9.5
ptyprocess                    0.7.0
pure-eval                     0.2.2
Pygments                      2.17.2
pyparsing                     3.1.1
pyproject_hooks               1.0.0
pytest                        7.4.3
python-dateutil               2.8.2
pytz                          2023.3
pyzmq                         25.1.1
referencing                   0.30.2
requests                      2.31.0
rpds-py                       0.15.2
six                           1.16.0
snowballstemmer               2.2.0
soupsieve                     2.5
Sphinx                        7.1.2
sphinxcontrib-applehelp       1.0.4
sphinxcontrib-devhelp         1.0.5
sphinxcontrib-htmlhelp        2.0.4
sphinxcontrib-jsmath          1.0.1
sphinxcontrib-qthelp          1.0.3
sphinxcontrib-serializinghtml 1.1.9
stack-data                    0.6.3
tinycss2                      1.2.1
tomli                         2.0.1
tornado                       6.3.3
traitlets                     5.14.0
trove-classifiers             2023.12.14
typing_extensions             4.9.0
urllib3                       1.26.18
wcwidth                       0.2.12
webencodings                  0.5.1
wheel                         0.42.0
widgetsnbextension            4.0.9
zipp                          3.17.0

Please let me know if you need more details or want me to perform some diagnostics.