Skip to content
View jfy133's full-sized avatar
148 followers · 31 following

Achievements

Achievement: Starstruckx2Achievement: Pair Extraordinairex4Achievement: Pull Sharkx4Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Starstruckx2Achievement: Pair Extraordinairex4Achievement: Pull Sharkx4Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

Highlights

  • Pro

Organizations

@nf-core @SPAAM-community @sidora-tools @poseidon-framework

Block or report jfy133

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
jfy133/README.md

Hi there 👋, my name is James

I am a bioinformatician / biomolecular archaeologist, specialising in ancient metagenomics

My GitHub Stats

🤖 I like automation, metadata, documentation and community projects!

🧬 My current research focus is currently on improving throughput of NGS sequencing data processing, and authentication of very old metagenomic ancient DNA samples.

👪 I'm currently a core-team member of the nf-core initative of standardised Nextflow pipelines and I established the SPAAM-community of ancient metagenomics researchers.


Skills

nextflowNEXTFLOW

r

bioconda

bash

git

linux


Research

orcid google-scholar


Contact

linked-in twitter


Current projects

Nextflow Pipelines

Others


Mastodon

Pinned Loading

  1. MEx-IPA MEx-IPA Public

    Interactive results viewer for maltExtract

    R 3

  2. nf-core/eager nf-core/eager Public

    A fully reproducible and state-of-the-art ancient DNA analysis pipeline

    Nextflow 148 81

  3. cuperdec cuperdec Public

    R library to generate 'Cumulative Percent Decay' curves for microbial taxonomic profiles

    R 3

  4. SPAAM-community/AncientMetagenomeDir SPAAM-community/AncientMetagenomeDir Public

    Repository containing lists of all published ancient metagenomic (and related) samples and libraries

    HTML 67 32