From 02c17129365d78d851ae0f49e44415d11be93cdb Mon Sep 17 00:00:00 2001
From: Mark Tomko <mark.tomko.1@gmail.com>
Date: Tue, 27 Dec 2022 10:22:52 +0100
Subject: [PATCH] Replace sbt-github-packages with call to maven

---
 build.sbt           | 29 ++++++++++++++++++++++-------
 project/plugins.sbt |  1 -
 settings.xml        | 29 +++++++++++++++++++++++++++++
 3 files changed, 51 insertions(+), 8 deletions(-)
 create mode 100644 settings.xml

diff --git a/build.sbt b/build.sbt
index 1e7e3a4..89fc770 100644
--- a/build.sbt
+++ b/build.sbt
@@ -117,12 +117,24 @@ lazy val assemblySettings = List(
   assembly / mainClass := Some("org.broadinstitute.gpp.poolq3.PoolQ")
 )
 
-lazy val publishSettings = List(
-  // Publish to GitHub Packages:
-  githubOwner := "broadinstitute",
-  githubRepository := artifactId,
-  githubTokenSource := TokenSource.Environment("GITHUB_TOKEN") || TokenSource.GitConfig("github.token")
-)
+lazy val publishToGithubPackages = taskKey[Unit]("Publish jar to Github Packages")
+
+publishToGithubPackages := {
+  if (!sys.env.keySet.contains("GITHUB_TOKEN")) throw new Exception("You must set environmental variable GITHUB_TOKEN")
+  val mvn =
+    s"""mvn deploy:deploy-file
+       |-Durl=https://maven.pkg.github.com/poolq
+       |-DrepositoryId=github
+       |-Dfile=${(Compile / packageBin).value}
+       |-DpomFile=${(Compile / makePom).value}
+       |-Dsources=${(Compile / packageSrc).value}
+       |-Djavadoc=${(Compile / packageDoc).value}
+       |--settings=settings.xml""".stripLineEnd
+
+  println(s"Executing shell command $mvn")
+  import scala.sys.process._
+  if (mvn.! != 0) throw new Exception("publish failed")
+}
 
 lazy val poolq = project
   .in(file("."))
@@ -144,4 +156,7 @@ lazy val poolq = project
   )
   .settings(headerSettings: _*)
   .settings(assemblySettings: _*)
-  .settings(publishSettings: _*)
+  .settings(
+    // override the normal publish tasks with the maven task
+    publish := publishToGithubPackages.value
+  )
diff --git a/project/plugins.sbt b/project/plugins.sbt
index d6f5adc..576a486 100644
--- a/project/plugins.sbt
+++ b/project/plugins.sbt
@@ -1,6 +1,5 @@
 addSbtPlugin("ch.epfl.scala" % "sbt-missinglink" % "0.3.3")
 addSbtPlugin("ch.epfl.scala" % "sbt-scalafix" % "0.10.4")
-addSbtPlugin("com.codecommit" % "sbt-github-packages" % "0.5.3")
 addSbtPlugin("com.eed3si9n" % "sbt-assembly" % "1.2.0")
 addSbtPlugin("com.eed3si9n" % "sbt-buildinfo" % "0.11.0")
 addSbtPlugin("com.github.cb372" % "sbt-explicit-dependencies" % "0.2.16")
diff --git a/settings.xml b/settings.xml
new file mode 100644
index 0000000..fa5296f
--- /dev/null
+++ b/settings.xml
@@ -0,0 +1,29 @@
+<settings xmlns="http://maven.apache.org/SETTINGS/1.0.0"
+  xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" 
+  xsi:schemaLocation="http://maven.apache.org/SETTINGS/1.0.0
+                      http://maven.apache.org/xsd/settings-1.0.0.xsd">
+  <activeProfiles>
+    <activeProfile>github</activeProfile>
+  </activeProfiles>
+  <profiles>
+    <profile>
+      <id>github</id>
+      <repositories>
+        <repository>
+          <id>github</id>
+          <url>https://maven.pkg.github.com/poolq</url>
+          <snapshots>
+            <enabled>true</enabled>
+          </snapshots>
+        </repository>
+      </repositories>
+    </profile>
+  </profiles>
+  <servers>
+    <server>
+      <id>github</id>
+      <username>broadinstitute</username>
+      <password>${GITHUB_TOKEN}</password>
+    </server>
+  </servers>
+</settings>