arguments for --soloCellFilter

[onmyojiyys]

In STAR manual document, 'EmptyDrops CR' was selected for '--soloCellFilter'. Can be followed by 10 numeric parameters: nExpectedCells maxPercentile
maxMinRatio indMin indMax umiMin umiMinFracMedian candMaxN FDR
simN. What is the specific meaning of each indicator in the 10 paramneters?

[alexdobin]

Hi @onmyojiyys

This algorithm replicates 10X call calling function, which is based on the EmptyDrops algorithms.
If you want to tweak this algorithm, I recommend using EmptyDrops implementation.