.travis.yml

sudo: required
language: java
jdk: oraclejdk8
services:
- docker
cache:
  directories:
  - $HOME/.m2
  - $HOME/maven
env:
  matrix:
  - MAVEN_VERSION=3.5.4 TEST=core
  - MAVEN_VERSION=3.5.4 TEST=python-validator
  - MAVEN_VERSION=3.5.4 TEST=sanity-checks
  - MAVEN_VERSION=3.5.4 TEST=end-to-end
install:
- |
  if [[ "${TEST}" == core || "${TEST}" == end-to-end ]]
  then
      mkdir -p ~/maven
      test -d ~/maven/$MAVEN_VERSION/bin || { \
          find ~/maven -mindepth 1 -delete && \
          mkdir -p ~/maven/$MAVEN_VERSION && \
          wget -O - http://www-us.apache.org/dist/maven/maven-3/${MAVEN_VERSION}/binaries/apache-maven-${MAVEN_VERSION}-bin.tar.gz | \
              tar -C ~/maven/$MAVEN_VERSION --strip-components=1 -xzf -; }
  fi
- |
  if [[ "${TEST}" == python-validator ]]
  then
      sudo apt-get install python3.4-venv
      python3.4 -m venv ~/python-env-validator
      source ~/python-env-validator/bin/activate
      trap 'deactivate' EXIT
      pip install -r requirements.txt
  fi
before_script:
- |
  if [[ "${TEST}" == core ]]
  then
      mysql --user root --password= <<< 'CREATE DATABASE cgds_test' && \
      mysql --user root --password= <<< "CREATE USER 'cbio_user'@'localhost' IDENTIFIED BY 'somepassword'" && \
      mysql --user root --password= <<< "GRANT ALL ON cgds_test.* TO 'cbio_user'@'localhost'" && \
      mysql --user root --password= <<< "flush privileges"
  fi
script:
- |
  if [[ "${TEST}" == python-validator ]]
  then
      source ~/python-env-validator/bin/activate
      trap 'deactivate' EXIT
      export PYTHONPATH="$PWD/core/src/main/scripts:$PYTHONPATH" && \
      pushd core/src/test/scripts/ && \
      python unit_tests_validate_data.py && \
      python system_tests_validate_data.py && \
      python system_tests_validate_studies.py && \
      popd
  fi
- |
  if [[ "${TEST}" == sanity-checks ]]
  then
      bash test/test_db_version.sh
  fi
- |
  if [[ "${TEST}" == core ]]
  then
      mkdir -p ~/.m2 && \
      cp .travis/settings.xml ~/.m2
  fi
- |
  if [[ "${TEST}" == core ]]
  then
      ~/maven/$MAVEN_VERSION/bin/mvn \
          -e \
          -U \
          -Ddb.user=cbio_user \
          -Ddb.password=somepassword \
          clean \
          install \
          integration-test
  fi
- |
  if [[ "${TEST}" == end-to-end ]]
  then
      ~/maven/$MAVEN_VERSION/bin/mvn \
          -U \
          -DskipTests \
          clean install
  fi
- |
  if [[ "${TEST}" == end-to-end ]]
  then
      cd test/end-to-end && \
      docker-compose up -d && \
      sleep 30s && \
      cd ../.. && \
      # spot visual regression by comparing screenshots in the repo with
      # screenshots of this portal loaded with the data from the amazon db
      bash test/end-to-end/test_make_screenshots.sh test/end-to-end/screenshots.yml
  fi