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Crash on Mac OS X 10.11.6 #64

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grero opened this issue Aug 4, 2016 · 1 comment
Open

Crash on Mac OS X 10.11.6 #64

grero opened this issue Aug 4, 2016 · 1 comment

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@grero
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grero commented Aug 4, 2016

I'm having problems getting Immerse to work on my Mac. This is what I get:

➜  ~ julia
               _
   _       _ _(_)_     |  A fresh approach to technical computing
  (_)     | (_) (_)    |  Documentation: http://docs.julialang.org
   _ _   _| |_  __ _   |  Type "?help" for help.
  | | | | | | |/ _` |  |
  | | |_| | | | (_| |  |  Version 0.4.6 (2016-06-19 17:16 UTC)
 _/ |\__'_|_|_|\__'_|  |  Official http://julialang.org/ release
|__/                   |  x86_64-apple-darwin13.4.0

julia> using Immerse
WARNING: New definition
    +(AbstractArray{T<:Any, 2}, WoodburyMatrices.SymWoodbury) at /Users/roger/.julia/v0.4/WoodburyMatrices/src/SymWoodburyMatrices.jl:106
is ambiguous with:
    +(DataArrays.DataArray, AbstractArray) at /Users/roger/.julia/v0.4/DataArrays/src/operators.jl:276.
To fix, define
    +(DataArrays.DataArray{T<:Any, 2}, WoodburyMatrices.SymWoodbury)
before the new definition.
WARNING: New definition
    +(AbstractArray{T<:Any, 2}, WoodburyMatrices.SymWoodbury) at /Users/roger/.julia/v0.4/WoodburyMatrices/src/SymWoodburyMatrices.jl:106
is ambiguous with:
    +(DataArrays.AbstractDataArray, AbstractArray) at /Users/roger/.julia/v0.4/DataArrays/src/operators.jl:300.
To fix, define
    +(DataArrays.AbstractDataArray{T<:Any, 2}, WoodburyMatrices.SymWoodbury)
before the new definition.
2016-08-04 11:46:55.199 julia[72269:162920] *** WARNING: Method userSpaceScaleFactor in class NSView is deprecated on 10.7 and later. It should not be used in new applications. Use convertRectToBacking: instead.
WARNING: Method definition display(Base.REPL.REPLDisplay{R<:Base.REPL.AbstractREPL}, Base.Multimedia.MIME{:text/html}, Gadfly.Plot) in module Gadfly at /Users/roger/.julia/v0.4/Gadfly/src/Gadfly.jl:949 overwritten in module Immerse at /Users/roger/.julia/v0.4/Immerse/src/display_gadfly.jl:162.

julia> plot(x=rand(10), y=rand(10),Geom.point)
2016-08-04 11:48:14.812 julia[72269:162920] -[__NSCFType symbolicTraits]: unrecognized selector sent to instance 0x7fad1f0129f0
2016-08-04 11:48:14.821 julia[72269:162920] An uncaught exception was raised
2016-08-04 11:48:14.821 julia[72269:162920] -[__NSCFType symbolicTraits]: unrecognized selector sent to instance 0x7fad1f0129f0
2016-08-04 11:48:14.821 julia[72269:162920] (
    0   CoreFoundation                      0x00007fff94a0e4f2 __exceptionPreprocess + 178
    1   libobjc.A.dylib                     0x00007fff9a598f7e objc_exception_throw + 48
    2   CoreFoundation                      0x00007fff94a781ad -[NSObject(NSObject) doesNotRecognizeSelector:] + 205
    3   CoreFoundation                      0x00007fff9497e571 ___forwarding___ + 1009
    4   CoreFoundation                      0x00007fff9497e0f8 _CF_forwarding_prep_0 + 120
    5   UIFoundation                        0x00007fff8e6317c0 -[__NSFontTypefaceInfo _postscriptName] + 345
    6   UIFoundation                        0x00007fff8e630b23 +[__NSFontTypefaceInfo typefaceInfoForPostscriptName:options:] + 949
    7   UIFoundation                        0x00007fff8e63756f __NSGetMetaFontInstance + 983
    8   libgdk-3.0.dylib                    0x000000031716ebee _gdk_quartz_screen_get_setting + 392
    9   libgtk-3.dylib                      0x000000031950f6dd gtk_settings_get_property + 198
    10  libgobject-2.0.dylib                0x0000000316bcd0a5 g_object_get_valist + 270
    11  libgobject-2.0.dylib                0x0000000316bcd513 g_object_get + 177
    12  libgtk-3.dylib                      0x00000003193e49ee _gtk_css_font_size_get_default + 50
    13  libgtk-3.dylib                      0x00000003193e5923 gtk_css_value_font_size_compute + 211
    14  libgtk-3.dylib                      0x00000003193efde6 gtk_css_value_initial_compute + 218
    15  libgtk-3.dylib                      0x0000000319402488 gtk_css_static_style_compute_value + 106
    16  libgtk-3.dylib                      0x00000003193f0ed8 _gtk_css_lookup_resolve + 111
    17  libgtk-3.dylib                      0x0000000319402406 gtk_css_static_style_new_compute + 117
    18  libgtk-3.dylib                      0x000000031940236e gtk_css_static_style_get_default + 84
    19  libgtk-3.dylib                      0x00000003193f1a82 gtk_css_node_init + 23
    20  libgobject-2.0.dylib                0x0000000316bde771 g_type_create_instance + 621
    21  libgobject-2.0.dylib                0x0000000316bcc4e4 g_object_new_internal + 56
    22  libgobject-2.0.dylib                0x0000000316bcbf81 g_object_newv + 493
    23  libgobject-2.0.dylib                0x0000000316bcbd5d g_object_new + 193
    24  libgtk-3.dylib                      0x000000031940987a gtk_css_widget_node_new + 30
    25  libgtk-3.dylib                      0x00000003195ab7d7 gtk_widget_init + 240
    26  libgobject-2.0.dylib                0x0000000316bde771 g_type_create_instance + 621
    27  libgobject-2.0.dylib                0x0000000316bcc4e4 g_object_new_internal + 56
    28  libgobject-2.0.dylib                0x0000000316bcc3c9 g_object_new_valist + 998
    29  libgobject-2.0.dylib                0x0000000316bcbd4f g_object_new + 179
    30  ???                                 0x000000030cf1d41e 0x0 + 13102076958
    31  ???                                 0x000000030cf1d338 0x0 + 13102076728
    32  ???                                 0x000000030cf1d275 0x0 + 13102076533
    33  ???                                 0x000000030cf112c3 0x0 + 13102027459
    34  ???                                 0x000000030cf0a249 0x0 + 13101998665
    35  ???                                 0x000000030cf0742c 0x0 + 13101986860
    36  ???                                 0x000000030cf072b1 0x0 + 13101986481
    37  libjulia.dylib                      0x0000000108706cf6 jl_apply_generic + 422
    38  ???                                 0x000000030cefb14d 0x0 + 13101936973
    39  ???                                 0x000000030cefafe7 0x0 + 13101936615
    40  libjulia.dylib                      0x0000000108706c83 jl_apply_generic + 307
    41  ???                                 0x000000030cefa2f4 0x0 + 13101933300
    42  libjulia.dylib                      0x0000000108706cf6 jl_apply_generic + 422
    43  ???                                 0x000000030ceebd33 0x0 + 13101874483
    44  ???                                 0x000000030ceeb9e2 0x0 + 13101873634
    45  libjulia.dylib                      0x0000000108706c83 jl_apply_generic + 307
    46  ???                                 0x000000030ceeb936 0x0 + 13101873462
    47  ???                                 0x000000030ceeb7f2 0x0 + 13101873138
    48  libjulia.dylib                      0x0000000108706c83 jl_apply_generic + 307
    49  ???                                 0x000000030cebef51 0x0 + 13101690705
    50  sys.dylib                           0x0000000109c11027 julia_run_interface_18234 + 487
    51  sys.dylib                           0x0000000109c11090 jlcall_run_interface_18234 + 16
    52  libjulia.dylib                      0x0000000108706c83 jl_apply_generic + 307
    53  sys.dylib                           0x0000000109c1a3d1 julia_run_frontend_18517 + 609
    54  sys.dylib                           0x0000000109c19b51 julia_run_repl_18503 + 241
    55  libjulia.dylib                      0x0000000108706c83 jl_apply_generic + 307
    56  sys.dylib                           0x0000000109c2a4eb julia__start_18909 + 3563
    57  sys.dylib                           0x0000000109c2a7f9 jlcall__start_18909 + 9
    58  libjulia.dylib                      0x0000000108706c83 jl_apply_generic + 307
    59  julia                               0x00000001086ef684 true_main + 276
    60  julia                               0x00000001086ef556 main + 86
    61  julia                               0x00000001086ee8a4 start + 52
    62  ???                                 0x0000000000000001 0x0 + 1
)
2016-08-04 11:48:14.822 julia[72269:162920] *** Terminating app due to uncaught exception 'NSInvalidArgumentException', reason: '-[__NSCFType symbolicTraits]: unrecognized selector sent to instance 0x7fad1f0129f0'
*** First throw call stack:
(
    0   CoreFoundation                      0x00007fff94a0e4f2 __exceptionPreprocess + 178
    1   libobjc.A.dylib                     0x00007fff9a598f7e objc_exception_throw + 48
    2   CoreFoundation                      0x00007fff94a781ad -[NSObject(NSObject) doesNotRecognizeSelector:] + 205
    3   CoreFoundation                      0x00007fff9497e571 ___forwarding___ + 1009
    4   CoreFoundation                      0x00007fff9497e0f8 _CF_forwarding_prep_0 + 120
    5   UIFoundation                        0x00007fff8e6317c0 -[__NSFontTypefaceInfo _postscriptName] + 345
    6   UIFoundation                        0x00007fff8e630b23 +[__NSFontTypefaceInfo typefaceInfoForPostscriptName:options:] + 949
    7   UIFoundation                        0x00007fff8e63756f __NSGetMetaFontInstance + 983
    8   libgdk-3.0.dylib                    0x000000031716ebee _gdk_quartz_screen_get_setting + 392
    9   libgtk-3.dylib                      0x000000031950f6dd gtk_settings_get_property + 198
    10  libgobject-2.0.dylib                0x0000000316bcd0a5 g_object_get_valist + 270
    11  libgobject-2.0.dylib                0x0000000316bcd513 g_object_get + 177
    12  libgtk-3.dylib                      0x00000003193e49ee _gtk_css_font_size_get_default + 50
    13  libgtk-3.dylib                      0x00000003193e5923 gtk_css_value_font_size_compute + 211
    14  libgtk-3.dylib                      0x00000003193efde6 gtk_css_value_initial_compute + 218
    15  libgtk-3.dylib                      0x0000000319402488 gtk_css_static_style_compute_value + 106
    16  libgtk-3.dylib                      0x00000003193f0ed8 _gtk_css_lookup_resolve + 111
    17  libgtk-3.dylib                      0x0000000319402406 gtk_css_static_style_new_compute + 117
    18  libgtk-3.dylib                      0x000000031940236e gtk_css_static_style_get_default + 84
    19  libgtk-3.dylib                      0x00000003193f1a82 gtk_css_node_init + 23
    20  libgobject-2.0.dylib                0x0000000316bde771 g_type_create_instance + 621
    21  libgobject-2.0.dylib                0x0000000316bcc4e4 g_object_new_internal + 56
    22  libgobject-2.0.dylib                0x0000000316bcbf81 g_object_newv + 493
    23  libgobject-2.0.dylib                0x0000000316bcbd5d g_object_new + 193
    24  libgtk-3.dylib                      0x000000031940987a gtk_css_widget_node_new + 30
    25  libgtk-3.dylib                      0x00000003195ab7d7 gtk_widget_init + 240
    26  libgobject-2.0.dylib                0x0000000316bde771 g_type_create_instance + 621
    27  libgobject-2.0.dylib                0x0000000316bcc4e4 g_object_new_internal + 56
    28  libgobject-2.0.dylib                0x0000000316bcc3c9 g_object_new_valist + 998
    29  libgobject-2.0.dylib                0x0000000316bcbd4f g_object_new + 179
    30  ???                                 0x000000030cf1d41e 0x0 + 13102076958
    31  ???                                 0x000000030cf1d338 0x0 + 13102076728
    32  ???                                 0x000000030cf1d275 0x0 + 13102076533
    33  ???                                 0x000000030cf112c3 0x0 + 13102027459
    34  ???                                 0x000000030cf0a249 0x0 + 13101998665
    35  ???                                 0x000000030cf0742c 0x0 + 13101986860
    36  ???                                 0x000000030cf072b1 0x0 + 13101986481
    37  libjulia.dylib                      0x0000000108706cf6 jl_apply_generic + 422
    38  ???                                 0x000000030cefb14d 0x0 + 13101936973
    39  ???                                 0x000000030cefafe7 0x0 + 13101936615
    40  libjulia.dylib                      0x0000000108706c83 jl_apply_generic + 307
    41  ???                                 0x000000030cefa2f4 0x0 + 13101933300
    42  libjulia.dylib                      0x0000000108706cf6 jl_apply_generic + 422
    43  ???                                 0x000000030ceebd33 0x0 + 13101874483
    44  ???                                 0x000000030ceeb9e2 0x0 + 13101873634
    45  libjulia.dylib                      0x0000000108706c83 jl_apply_generic + 307
    46  ???                                 0x000000030ceeb936 0x0 + 13101873462
    47  ???                                 0x000000030ceeb7f2 0x0 + 13101873138
    48  libjulia.dylib                      0x0000000108706c83 jl_apply_generic + 307
    49  ???                                 0x000000030cebef51 0x0 + 13101690705
    50  sys.dylib                           0x0000000109c11027 julia_run_interface_18234 + 487
    51  sys.dylib                           0x0000000109c11090 jlcall_run_interface_18234 + 16
    52  libjulia.dylib                      0x0000000108706c83 jl_apply_generic + 307
    53  sys.dylib                           0x0000000109c1a3d1 julia_run_frontend_18517 + 609
    54  sys.dylib                           0x0000000109c19b51 julia_run_repl_18503 + 241
    55  libjulia.dylib                      0x0000000108706c83 jl_apply_generic + 307
    56  sys.dylib                           0x0000000109c2a4eb julia__start_18909 + 3563
    57  sys.dylib                           0x0000000109c2a7f9 jlcall__start_18909 + 9
    58  libjulia.dylib                      0x0000000108706c83 jl_apply_generic + 307
    59  julia                               0x00000001086ef684 true_main + 276
    60  julia                               0x00000001086ef556 main + 86
    61  julia                               0x00000001086ee8a4 start + 52
    62  ???                                 0x0000000000000001 0x0 + 1
)
libc++abi.dylib: terminating with uncaught exception of type NSException

signal (6): Abort trap: 6
__pthread_kill at /usr/lib/system/libsystem_kernel.dylib (unknown line)
[1]    72269 abort      julia

Versioninfo and Pkg.status():

julia> versioninfo()
Julia Version 0.4.6
Commit 2e358ce (2016-06-19 17:16 UTC)
Platform Info:
  System: Darwin (x86_64-apple-darwin13.4.0)
  CPU: Intel(R) Core(TM) i5-5257U CPU @ 2.70GHz
  WORD_SIZE: 64
  BLAS: libopenblas (USE64BITINT DYNAMIC_ARCH NO_AFFINITY Haswell)
  LAPACK: libopenblas64_
  LIBM: libopenlibm
  LLVM: libLLVM-3.3
julia> Pkg.status()
WARNING: unknown GLM commit dc0dcebc, metadata may be ahead of package cache
WARNING: unknown GLM commit bd1a03a2, metadata may be ahead of package cache
WARNING: unknown GLM commit a772ce48, metadata may be ahead of package cache
WARNING: unknown GLM commit 9a734eb3, metadata may be ahead of package cache
WARNING: unknown PlotUtils commit 681b291a, metadata may be ahead of package cache
WARNING: unknown PlotUtils commit e2f421de, metadata may be ahead of package cache
WARNING: unknown PlotUtils commit ada3c997, metadata may be ahead of package cache
WARNING: unknown PlotUtils commit c8d84fe3, metadata may be ahead of package cache
34 required packages:
 - ArgParse                      0.3.1
 - Atom                          0.4.2+             julia-0.4
 - Compose                       0.4.2+             roger (dirty)
 - DSP                           0.0.11
 - DataFramesMeta                0.1.3
 - Distances                     0.3.2
 - FastAnonymous                 0.3.2
 - Fontconfig                    0.0.2
 - GLM                           0.5.0+             vonmises (dirty)
 - GLVisualize                   0.0.10
 - GR                            0.14.0
 - Gadfly                        0.4.2+             roger (dirty)
 - Gtk                           0.10.1
 - Julia                        1.1.10
 - Images                        0.5.7
 - Immerse                       0.0.11
 - JLD                           0.6.3
 - KernelEstimator               0.1.7
 - LARS                          0.0.3
 - LibGit2                       0.3.8
 - Lint                          0.2.4
 - MAT                           0.2.14
 - MATLAB                        0.2.4+             master
 - MultivariateStats             0.3.0
 - ODE                           0.2.1+             master
 - ProfileView                   0.1.3
 - ProgressMeter                 0.3.2
 - PyPlot                        2.2.0
 - QuartzImageIO                 0.1.2
 - Datasets                     0.1.3
 - Requests                      0.3.9
 - TerminalExtensions            0.0.3
 - VennEuler                     0.0.1+             master
 - Winston                       0.10.2+            roger (dirty)
118 additional packages:
 - ArrayViews                    0.6.4
 - BinDeps                       0.4.2
 - Blink                         0.3.4
 - Blosc                         0.1.6
 - BufferedStreams               0.1.6
 - Cairo                         0.2.33
 - Calculus                      0.1.15
 - CodeTools                     0.3.0+             master
 - Codecs                        0.1.5
 - ColorTypes                    0.2.5
 - ColorVectorSpace              0.1.5
 - Colors                        0.6.6
 - Compat                        0.8.6
 - Conda                         0.2.2
 - Connectivity                  0.0.0-             devel (unregistered, dirty)
 - Contour                       0.1.0
 - Cubature                      1.2.0
 - DataArrays                    0.3.8
 - DataFrames                    0.7.6
 - DataStructures                0.4.5
 - Dates                         0.4.4
 - Debug                         0.1.6
 - Decoding                      0.0.0-             master (unregistered, dirty)
 - DirectedInformation           0.0.0-             master (unregistered, dirty)
 - DirectionalRegression         0.0.0-             master (unregistered)
 - Distributions                 0.8.10             77eea93c (dirty)
 - Docile                        0.5.23
 - DualNumbers                   0.2.2
 - Entropies                     0.0.0-             master (unregistered, dirty)
 - Eyelink                       0.0.0-             d310a385 (unregistered)
 - FactCheck                     0.4.3
 - FileIO                        0.1.0
 - FixedPointNumbers             0.1.4
 - FixedSizeArrays               0.2.2
 - ForwardDiff                   0.2.2
 - FreeType                      1.0.3
 - GLAbstraction                 0.1.0
 - GLFW                          1.1.3
 - GLWindow                      0.1.4
 - GUICheck                      0.0.0-             master (unregistered)
 - Gzip                          0.2.19
 - GeometryTypes                 0.1.6
 - Graphics                      0.1.3
 - Grid                          0.4.1
 - GtkInteract                   0.0.0-             master (unregistered)
 - GtkUtilities                  0.0.9
 - HDF5                          0.6.4
 - Hexagons                      0.0.4
 - Hiccup                        0.0.3
 - Homebrew                      0.3.3              master
 - HttpCommon                    0.2.6
 - HttpParser                    0.1.1
 - HttpServer                    0.1.5
 - HypothesisTests               0.2.10+            roger
 - IniFile                       0.2.5
 - Interact                      0.3.1+             master
 - Iterators                     0.1.9
 - JSON                          0.6.0
 - JuliaParser                   0.6.4
 - KernelDensity                 0.1.2
 - LNR                           0.0.2
 - LaTeXStrings                  0.2.0
 - Lazy                          0.10.1
 - LegacyStrings                 0.1.1
 - Libz                          0.2.0
 - Loess                         0.0.6
 - MacroTools                    0.3.0
 - MathProgBase                  0.5.1
 - MbedTLS                       0.2.5
 - Measures                      0.0.3
 - Media                         0.1.2
 - MeshIO                        0.0.5
 - ModernGL                      0.0.8
 - Mustache                      0.0.15
 - Mux                           0.2.0
 - NLopt                         0.3.2
 - NaNMath                       0.2.1
 - Nettle                        0.2.3
 - Optim                         0.5.0
 - PDMats                        0.4.2
 - Packing                       0.0.4
 - PeakFinder                    0.0.0-             master (unregistered, dirty)
 - PeriStimulusTimeHistograms    0.0.0-             master (unregistered)
 - PlotUtils                     0.0.0-             master
 - Polynomials                   0.0.5
 - PositiveFactorizations        0.0.2
 - Primes                        0.1.1
 - PyCall                        1.7.0
 - Quaternions                   0.1.1
 - Reactive                      0.3.4
 - Reexport                      0.0.3
 - RenyiEntropyEstimator         0.0.0-             master (unregistered, dirty)
 - Requires                      0.2.2
 - ResponseLatency               0.0.0-             master (unregistered)
 - RobustRegression              0.0.0-             master (unregistered)
 - Roots                         0.2.0
 - SHA                           0.2.0
 - SIUnits                       0.0.6
 - SaccadeAnalysis               0.0.0-             master (unregistered, dirty)
 - ShiftData                     0.0.0-             master (unregistered)
 - Showoff                       0.0.7
 - SignedDistanceFields          0.0.1
 - SortingAlgorithms             0.1.0
 - Spiketrains                   0.0.0-             master (unregistered, dirty)
 - StatUtils                     0.0.0-             master (unregistered)
 - StatsBase                     0.8.3
 - StatsFuns                     0.2.2
 - Stimulus                      0.0.0-             jv0.4 (unregistered, dirty)
 - TexExtensions                 0.0.3
 - TextWrap                      0.1.6
 - Tk                            0.3.8
 - URIParser                     0.1.5
 - VennDiagrams                  0.0.0-             roger (unregistered, dirty)
 - WebSockets                    0.1.2
 - WoodburyMatrices              0.2.0
 - Yeppp                         0.0.10
 - ZMQ                           0.3.2
 - Zlib                          0.1.12
@bjarthur
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have you tried julia 0.5?

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