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Ensembl Project

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  1. ensembl-vep ensembl-vep Public

    The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants

    Perl 456 152

  2. WiggleTools WiggleTools Public

    Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency

    C 144 25

  3. VEP_plugins VEP_plugins Public

    Plugins for the Ensembl Variant Effect Predictor (VEP)

    Perl 142 117

  4. ensembl-rest ensembl-rest Public

    Language agnostic RESTful data access to Ensembl data over HTTP

    Perl 141 63

  5. ensembl ensembl Public

    The Ensembl Core Perl API and SQL schema

    Perl 79 76

  6. ensembl-pipeline ensembl-pipeline Public

    *DEPRECATED* Job management for the Ensembl Genebuild pipeline

    Perl 60 29

Repositories

Showing 10 of 210 repositories
  • ensembl-compara Public

    The Ensembl Compara Perl API and SQL schema

    Ensembl/ensembl-compara’s past year of commit activity
    Perl 51 Apache-2.0 69 0 4 Updated Nov 30, 2024
  • ensembl-biomart Public

    Code to build the ensembl and ensembl genomes marts

    Ensembl/ensembl-biomart’s past year of commit activity
    Perl 3 8 0 1 Updated Nov 29, 2024
  • public-plugins Public

    Plugins for an Ensembl website

    Ensembl/public-plugins’s past year of commit activity
    JavaScript 9 Apache-2.0 46 0 3 Updated Nov 28, 2024
  • ensembl-production Public

    Ensembl Production code

    Ensembl/ensembl-production’s past year of commit activity
    Perl 11 Apache-2.0 42 0 9 Updated Nov 28, 2024
  • ensembl-production-metazoa Public

    Metazoan production helper library and script to import ad-hoc annotations.

    Ensembl/ensembl-production-metazoa’s past year of commit activity
    Shell 1 Apache-2.0 1 0 0 Updated Nov 28, 2024
  • ensembl-metadata-api Public

    ensembl_genome_metadata schema SQLAlchemy ORM layer

    Ensembl/ensembl-metadata-api’s past year of commit activity
    Python 1 Apache-2.0 2 0 2 Updated Nov 28, 2024
  • ensembl-production-imported Public

    Production pipelines used by data-teams to process imported genomes (former EnsemblGenomes pipelines)

    Ensembl/ensembl-production-imported’s past year of commit activity
    Perl 0 Apache-2.0 4 0 1 Updated Nov 28, 2024
  • ensembl-thoas Public

    Son of Ariadne, a GraphQL server and supporting software

    Ensembl/ensembl-thoas’s past year of commit activity
    Python 2 Apache-2.0 0 0 5 Updated Nov 27, 2024
  • VEP_plugins Public

    Plugins for the Ensembl Variant Effect Predictor (VEP)

    Ensembl/VEP_plugins’s past year of commit activity
    Perl 142 Apache-2.0 117 7 4 Updated Nov 27, 2024
  • Ensembl/ensembl-web-tools-api’s past year of commit activity
    Python 0 Apache-2.0 0 0 1 Updated Nov 27, 2024