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environment.yml
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environment.yml
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name: CytoDiffusion
channels:
- conda-forge
- xformers
- nvidia
- pytorch
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- abseil-cpp=20211102.0=hd4dd3e8_0
- accelerate=0.32.1=pyhd8ed1ab_0
- aiohttp=3.9.5=py39h5eee18b_0
- aiosignal=1.2.0=pyhd3eb1b0_0
- appdirs=1.4.4=pyhd3eb1b0_0
- arrow-cpp=14.0.2=h374c478_1
- async-timeout=4.0.3=py39h06a4308_0
- attrs=23.1.0=py39h06a4308_0
- aws-c-auth=0.6.19=h5eee18b_0
- aws-c-cal=0.5.20=hdbd6064_0
- aws-c-common=0.8.5=h5eee18b_0
- aws-c-compression=0.2.16=h5eee18b_0
- aws-c-event-stream=0.2.15=h6a678d5_0
- aws-c-http=0.6.25=h5eee18b_0
- aws-c-io=0.13.10=h5eee18b_0
- aws-c-mqtt=0.7.13=h5eee18b_0
- aws-c-s3=0.1.51=hdbd6064_0
- aws-c-sdkutils=0.1.6=h5eee18b_0
- aws-checksums=0.1.13=h5eee18b_0
- aws-crt-cpp=0.18.16=h6a678d5_0
- aws-sdk-cpp=1.10.55=h721c034_0
- blas=1.0=mkl
- boost-cpp=1.82.0=hdb19cb5_2
- bottleneck=1.3.7=py39ha9d4c09_0
- brotli=1.0.9=h5eee18b_8
- brotli-bin=1.0.9=h5eee18b_8
- brotli-python=1.0.9=py39h6a678d5_8
- bzip2=1.0.8=h5eee18b_6
- c-ares=1.19.1=h5eee18b_0
- ca-certificates=2024.7.4=hbcca054_0
- certifi=2024.7.4=py39h06a4308_0
- charset-normalizer=2.0.4=pyhd3eb1b0_0
- click=8.1.7=py39h06a4308_0
- colorama=0.4.6=pyhd8ed1ab_0
- contourpy=1.2.0=py39hdb19cb5_0
- cuda-cudart=11.8.89=0
- cuda-cupti=11.8.87=0
- cuda-libraries=11.8.0=0
- cuda-nvrtc=11.8.89=0
- cuda-nvtx=11.8.86=0
- cuda-runtime=11.8.0=0
- cycler=0.11.0=pyhd3eb1b0_0
- cyrus-sasl=2.1.28=h52b45da_1
- datasets=2.19.1=py39h06a4308_0
- dbus=1.13.18=hb2f20db_0
- diffusers=0.29.2=pyhd8ed1ab_0
- dill=0.3.8=py39h06a4308_0
- docker-pycreds=0.4.0=pyhd3eb1b0_0
- expat=2.6.2=h6a678d5_0
- ffmpeg=4.3=hf484d3e_0
- filelock=3.13.1=py39h06a4308_0
- fontconfig=2.14.1=h4c34cd2_2
- fonttools=4.51.0=py39h5eee18b_0
- freetype=2.12.1=h4a9f257_0
- frozenlist=1.4.0=py39h5eee18b_0
- fsspec=2024.3.1=py39h06a4308_0
- gflags=2.2.2=h6a678d5_1
- gitdb=4.0.7=pyhd3eb1b0_0
- gitpython=3.1.43=py39h06a4308_0
- glib=2.78.4=h6a678d5_0
- glib-tools=2.78.4=h6a678d5_0
- glog=0.5.0=h6a678d5_1
- gmp=6.2.1=h295c915_3
- gmpy2=2.1.2=py39heeb90bb_0
- gnutls=3.6.15=he1e5248_0
- grpc-cpp=1.48.2=he1ff14a_1
- gst-plugins-base=1.14.1=h6a678d5_1
- gstreamer=1.14.1=h5eee18b_1
- huggingface_hub=0.23.4=pyhd8ed1ab_0
- icu=73.1=h6a678d5_0
- idna=3.7=py39h06a4308_0
- importlib-metadata=8.0.0=pyha770c72_0
- importlib_resources=6.1.1=py39h06a4308_1
- intel-openmp=2023.1.0=hdb19cb5_46306
- jinja2=3.1.4=py39h06a4308_0
- joblib=1.4.2=py39h06a4308_0
- jpeg=9e=h5eee18b_1
- kiwisolver=1.4.4=py39h6a678d5_0
- krb5=1.20.1=h143b758_1
- lame=3.100=h7b6447c_0
- lcms2=2.12=h3be6417_0
- ld_impl_linux-64=2.38=h1181459_1
- lerc=3.0=h295c915_0
- libboost=1.82.0=h109eef0_2
- libbrotlicommon=1.0.9=h5eee18b_8
- libbrotlidec=1.0.9=h5eee18b_8
- libbrotlienc=1.0.9=h5eee18b_8
- libclang=14.0.6=default_hc6dbbc7_1
- libclang13=14.0.6=default_he11475f_1
- libcublas=11.11.3.6=0
- libcufft=10.9.0.58=0
- libcufile=1.9.1.3=0
- libcups=2.4.2=h2d74bed_1
- libcurand=10.3.5.147=0
- libcurl=8.7.1=h251f7ec_0
- libcusolver=11.4.1.48=0
- libcusparse=11.7.5.86=0
- libdeflate=1.17=h5eee18b_1
- libedit=3.1.20230828=h5eee18b_0
- libev=4.33=h7f8727e_1
- libevent=2.1.12=hdbd6064_1
- libffi=3.4.4=h6a678d5_1
- libgcc-ng=14.1.0=h77fa898_0
- libgfortran-ng=11.2.0=h00389a5_1
- libgfortran5=11.2.0=h1234567_1
- libglib=2.78.4=hdc74915_0
- libgomp=14.1.0=h77fa898_0
- libiconv=1.16=h5eee18b_3
- libidn2=2.3.4=h5eee18b_0
- libjpeg-turbo=2.0.0=h9bf148f_0
- libllvm14=14.0.6=hdb19cb5_3
- libnghttp2=1.57.0=h2d74bed_0
- libnpp=11.8.0.86=0
- libnvjpeg=11.9.0.86=0
- libpng=1.6.39=h5eee18b_0
- libpq=12.17=hdbd6064_0
- libprotobuf=3.20.3=he621ea3_0
- libssh2=1.11.0=h251f7ec_0
- libstdcxx-ng=11.2.0=h1234567_1
- libtasn1=4.19.0=h5eee18b_0
- libthrift=0.15.0=h1795dd8_2
- libtiff=4.5.1=h6a678d5_0
- libunistring=0.9.10=h27cfd23_0
- libuuid=1.41.5=h5eee18b_0
- libwebp-base=1.3.2=h5eee18b_0
- libxcb=1.15=h7f8727e_0
- libxkbcommon=1.0.1=h5eee18b_1
- libxml2=2.10.4=hfdd30dd_2
- llvm-openmp=14.0.6=h9e868ea_0
- lz4-c=1.9.4=h6a678d5_1
- markupsafe=2.1.3=py39h5eee18b_0
- matplotlib=3.8.4=py39h06a4308_0
- matplotlib-base=3.8.4=py39h1128e8f_0
- mkl=2023.1.0=h213fc3f_46344
- mkl-service=2.4.0=py39h5eee18b_1
- mkl_fft=1.3.8=py39h5eee18b_0
- mkl_random=1.2.4=py39hdb19cb5_0
- mpc=1.1.0=h10f8cd9_1
- mpfr=4.0.2=hb69a4c5_1
- mpmath=1.3.0=py39h06a4308_0
- multidict=6.0.4=py39h5eee18b_0
- multiprocess=0.70.15=py39h06a4308_0
- mysql=5.7.24=h721c034_2
- ncurses=6.4=h6a678d5_0
- nettle=3.7.3=hbbd107a_1
- networkx=3.2.1=py39h06a4308_0
- numexpr=2.8.7=py39h85018f9_0
- numpy=1.26.4=py39h5f9d8c6_0
- numpy-base=1.26.4=py39hb5e798b_0
- openh264=2.1.1=h4ff587b_0
- openjpeg=2.4.0=h9ca470c_1
- openssl=3.3.1=h4ab18f5_1
- orc=1.7.4=hb3bc3d3_1
- packaging=24.1=pyhd8ed1ab_0
- pandas=2.2.2=py39h6a678d5_0
- pathtools=0.1.2=pyhd3eb1b0_1
- pcre2=10.42=hebb0a14_1
- pillow=10.3.0=py39h5eee18b_0
- pip=24.0=py39h06a4308_0
- ply=3.11=py39h06a4308_0
- protobuf=3.20.3=py39h6a678d5_0
- psutil=5.9.0=py39h5eee18b_0
- pyarrow=14.0.2=py39h1eedbd7_0
- pybind11-abi=4=hd3eb1b0_1
- pyparsing=3.0.9=py39h06a4308_0
- pyqt=5.15.10=py39h6a678d5_0
- pyqt5-sip=12.13.0=py39h5eee18b_0
- pysocks=1.7.1=py39h06a4308_0
- python=3.9.19=h955ad1f_1
- python-dateutil=2.9.0post0=py39h06a4308_2
- python-tzdata=2023.3=pyhd3eb1b0_0
- python-xxhash=2.0.2=py39h5eee18b_1
- python_abi=3.9=2_cp39
- pytorch=2.3.1=py3.9_cuda11.8_cudnn8.7.0_0
- pytorch-cuda=11.8=h7e8668a_5
- pytorch-mutex=1.0=cuda
- pytz=2024.1=py39h06a4308_0
- pyyaml=6.0.1=py39h5eee18b_0
- qt-main=5.15.2=h53bd1ea_10
- re2=2022.04.01=h295c915_0
- readline=8.2=h5eee18b_0
- regex=2024.5.15=py39hd3abc70_0
- requests=2.32.2=py39h06a4308_0
- s2n=1.3.27=hdbd6064_0
- safetensors=0.4.3=py39h9fdd4d6_0
- scikit-learn=1.4.2=py39h1128e8f_1
- scipy=1.13.1=py39h5f9d8c6_0
- seaborn=0.13.2=py39h06a4308_0
- sentry-sdk=1.9.0=py39h06a4308_0
- setproctitle=1.2.2=py39h27cfd23_1004
- setuptools=69.5.1=py39h06a4308_0
- sip=6.7.12=py39h6a678d5_0
- six=1.16.0=pyhd3eb1b0_1
- smmap=4.0.0=pyhd3eb1b0_0
- snappy=1.1.10=h6a678d5_1
- sqlite=3.45.3=h5eee18b_0
- sympy=1.12=py39h06a4308_0
- tbb=2021.8.0=hdb19cb5_0
- threadpoolctl=3.5.0=py39h2f386ee_0
- tk=8.6.14=h39e8969_0
- tokenizers=0.15.1=py39h22610ee_0
- tomli=2.0.1=py39h06a4308_0
- torchaudio=2.3.1=py39_cu118
- torchtriton=2.3.1=py39
- torchvision=0.18.1=py39_cu118
- tornado=6.4.1=py39h5eee18b_0
- tqdm=4.66.4=pyhd8ed1ab_0
- transformers=4.37.2=py39h06a4308_1
- typing-extensions=4.11.0=py39h06a4308_0
- typing_extensions=4.11.0=py39h06a4308_0
- tzdata=2024a=h04d1e81_0
- unicodedata2=15.1.0=py39h5eee18b_0
- urllib3=2.2.2=py39h06a4308_0
- utf8proc=2.6.1=h5eee18b_1
- wandb=0.16.6=pyhd8ed1ab_0
- wheel=0.43.0=py39h06a4308_0
- xformers=0.0.27=py39_cu11.8.0_pyt2.3.1
- xxhash=0.8.0=h7f8727e_3
- xz=5.4.6=h5eee18b_1
- yaml=0.2.5=h7b6447c_0
- yarl=1.9.3=py39h5eee18b_0
- zipp=3.19.2=pyhd8ed1ab_0
- zlib=1.2.13=h5eee18b_1
- zstd=1.5.5=hc292b87_2
- pip:
- albucore==0.0.12
- albumentations==1.4.11
- annotated-types==0.7.0
- eval-type-backport==0.2.0
- imageio==2.34.2
- lazy-loader==0.4
- opencv-python-headless==4.10.0.84
- pydantic==2.8.2
- pydantic-core==2.20.1
- scikit-image==0.24.0
- tifffile==2024.7.2
- timm==1.0.7
prefix: /store/CIA/scfc3/miniconda3/envs/diff_test_4